BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB034D11LP1|AL429901
(835 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1262 1631 0.0
>3x_Contig1262
Length = 7137
Score = 1631 bits (822), Expect = 0.0
Identities = 823/824 (99%)
Strand = Plus / Plus
Query: 12 actctagtttttggtatatgtcatcgattttattctcgtcatggcgattattcttcttga 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1757 actctagtttttggtatatgtcatcgattttattctcgtcatggcgattattcttcttga 1816
Query: 72 tttgcaggtactcagaatctcgttcattgctaacaggtgaagaagactcactagtgaatt 131
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1817 tttgcaggtactcagaatctcgttcattgctaacaggtgaagaagactcactagtgaatt 1876
Query: 132 cagccttgtaccttggtttggattcaaaagattgatgccgattatgttgctgttcctgtt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1877 cagccttgtaccttggtttggattcaaaagattgatgccgattatgttgctgttcctgtt 1936
Query: 192 ggtctcgctgcattttcttgttgagttctgtgtatttgatcaattttgccctaaacgaac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1937 ggtctcgctgcattttcttgttgagttctgtgtatttgatcaattttgccctaaacgaac 1996
Query: 252 caattagcacgttcaatctatcaatttcttcttgtttttctgtaacctgtttgtggagat 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1997 caattagcacgttcaatctatcaatttcttcttgtttttctgtaacctgtttgtggagat 2056
Query: 312 ccttattctgttttatcaattcatttatcatagatgagttgtacttatattcttccggga 371
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2057 ccttattctgttttatcaattcatttatcatagatgagttgtacttatattcttccggga 2116
Query: 372 caatgcgctcgttcgcgtcattgtttccaaatacgaatcttctgggcgttgatccgttgt 431
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2117 caatgcgctcgttcgcgtcattgtttccaaatacgaatcttctgggcgttgatccgttgt 2176
Query: 432 gaatcatccttactggatctgctagaagctaataagttacgaatacgacacgcttatact 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2177 gaatcatccttactggatctgctagaagctaataagttacgaatacgacacgcttatact 2236
Query: 492 taattgctcgtgagaaatgtcaatatgtccaaatgatcaatgatcaatcgctcacatcca 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2237 taattgctcgtgagaaatgtcaatatgtccaaatgatcaatgatcaatcgctcacatcca 2296
Query: 552 caaaacacgataaataggtacctgtcgtgtttttgttttaaatcatcgacataagcggaa 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2297 caaaacacgataaataggtacctgtcgtgtttttgttttaaatcatcgacataagcggaa 2356
Query: 612 caatgaaaatatcgagatcacgtgacaacaaggttatgtcgatagatgtaaatgtacttt 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2357 caatgaaaatatcgagatcacgtgacaacaaggttatgtcgatagatgtaaatgtacttt 2416
Query: 672 acatgtgatcgtttccgtcatgctgctgttcgagagagtacagatgatggcaaaaggtgc 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2417 acatgtgatcgtttccgtcatgctgctgttcgagagagtacagatgatggcaaaaggtgc 2476
Query: 732 tgaaacaagtgcctcgagtttcaataacaccgtgtgaaatttcttttacatttaagaggk 791
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2477 tgaaacaagtgcctcgagtttcaataacaccgtgtgaaatttcttttacatttaagaggt 2536
Query: 792 agtaatgttatatagaagtactaaagtcaataaagcattatagt 835
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2537 agtaatgttatatagaagtactaaagtcaataaagcattatagt 2580
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6727
Number of Sequences: 1807
Number of extensions: 6727
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 835
length of database: 10,358,551
effective HSP length: 16
effective length of query: 819
effective length of database: 10,329,639
effective search space: 8459974341
effective search space used: 8459974341
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)